Comparative Genomics of <EM>Drosophila</em> and Human core promoters

Comparative Genomics of Drosophila and Human core promoters

Peter C. FitzGerald, David Sturgill, Andrey Shlyakhtenko, Brian Oliver and Charles Vinson

Suplemental Data:

Download raw data - sequence files (gzip, fasta format) for:
Search for specific octomers and view their distribution and clustering patterns.

[Useage note: Enter an exact octomer (8mer) sequence,case insensitive (e.g. TGACGTCA) or use the wildcard (*) to look for degenerate sequences (e.g. TGAC*TCA or TGACTC*).]

Data is returned sorted by decreasing Drosophila Clustering Factor (CF) value, and only the top 256 matches are returned for wildcard searches.

Search for Octomers Clustering in Drosophila and Human promoters
Peter_FitzGerald@nih.gov
National Institutes of Health (NIH), Bethesda, Maryland 20892